malariagen / malariagen-data-python

Analyse MalariaGEN data from Python
https://malariagen.github.io/malariagen-data-python/latest/
MIT License
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Refactor G123 #495

Closed alimanfoo closed 7 months ago

alimanfoo commented 7 months ago

Continuing towards #366, this PR refactors G123 functions into a separate module.

Also fix minor issues with SNP frequencies causing test failures (resolves #491).

codecov[bot] commented 7 months ago

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

Comparison is base (5a68bd8) 98.59% compared to head (b095b40) 98.65%.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## master #495 +/- ## ========================================== + Coverage 98.59% 98.65% +0.06% ========================================== Files 31 32 +1 Lines 2996 3133 +137 ========================================== + Hits 2954 3091 +137 Misses 42 42 ```

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