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malariagen / malariagen-data-python

Analyse MalariaGEN data from Python
https://malariagen.github.io/malariagen-data-python/latest/
MIT License
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Handle missing discordant read calls for Af1.x #551

Open leehart opened 1 month ago

leehart commented 1 month ago

Af1.x CNV releases will be considered complete without DRCs, only including HMM data and coverage calls.

I think the meaning of the pre-release pre arg, e.g. Af1(pre=True) will correspond to a known temporary incompleteness of data, rather than any embargo status, which will be handled separately via forthcoming terms-of-use info instead.

Possibly related: issue https://github.com/malariagen/malariagen-data-python/issues/89

leehart commented 1 month ago

Possibly connectable: issue https://github.com/malariagen/malariagen-data-python/issues/363 PR https://github.com/malariagen/malariagen-data-python/pull/409