Raise ValueError for missing CNV HMM

malariagen / malariagen-data-python

Analyse MalariaGEN data from Python

MIT License

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Closed leehart closed 1 month ago

leehart commented 1 month ago

Re: issue #363

Alternative to PR #575

Regarding issue #555, this would still require manual filtering of sample sets that don't have CNV HMM.

The user might not know ahead of time which sample sets have or don't have CNV HMM.

Sibling PR: #576

leehart commented 1 month ago

Closing in favour of PR #575 , which is more consistent with haplotypes() and more convenient for the user.