malariagen / malariagen-data-python

Analyse MalariaGEN data from Python
https://malariagen.github.io/malariagen-data-python/latest/
MIT License
13 stars 23 forks source link

Add clip_min parameter for Fst GWSS analyses #580

Closed alimanfoo closed 1 month ago

alimanfoo commented 1 month ago

Resolves #543.

I have added a parameter, clip_min, which allows the user to set an optional minimum value for the Fst GWSS functions. Previously they were automatically clipped to 0-1, which is confusing when looking at Fst data between relatives.


Contributed by @sanjaynagi in #544, copied here to run CI checks.