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malariagen / malariagen-data-python

Analyse MalariaGEN data from Python
https://malariagen.github.io/malariagen-data-python/latest/
MIT License
14 stars 24 forks source link

Gene CNV optimisation #655

Closed alimanfoo closed 1 day ago

alimanfoo commented 4 days ago

This PR speeds up computation of gene CNV data by only retrieving HMM data needed for the region or regions requested.

Resolves #654.

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alimanfoo commented 1 day ago

Merging soon if no objections.