Update vector Short Read Alignment Spec and WDL for removal of calmd

malariagen / pipelines

Pipelines for processing malaria parasite and mosquito genome sequence data.

MIT License

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Closed gbggrant closed 4 years ago

gbggrant commented 4 years ago

Update vector Short Read Alignment Spec and WDL to reflect removal of calmd and usage of Picard SetNmMdAndUqTags tool