malariagen / pipelines

Pipelines for processing malaria parasite and mosquito genome sequence data.
MIT License
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Migrating all data to gs://malariagen bucket #69

Closed gbggrant closed 3 years ago

gbggrant commented 3 years ago

Switched all gcp workflow input data to use reference data in gs://malariagen bucket. Switched all ShortReadAlignment input data to use gs://malariagen locations. Switched all SNPGenotyping input data to use gs://malariagen locations. Switched all ShortReadAlignmentAndGenotyping workflows to use gs://malariagen locations.