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malariagen / vector-data

Documentation, discussion forum and issue tracker for malaria vector genomic data released by MalariaGEN.
https://malariagen.github.io/vector-data/
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Add Ag3.10 release page #71

Closed leehart closed 4 months ago

leehart commented 4 months ago

Re: issue #70

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leehart commented 4 months ago

@ahernank Looking at the live page, there are a couple of minor anomalies:

This was output from the command to %pip install. I suppose we can clear this output before saving the notebook.

Note: you may need to restart the kernel to use updated packages.

  • I'll add a PR for that.

There is a blank cell above the table showing a "detailed breakdown", which I can't see how to fix, and appears on some notebooks but not others, and is probably quite harmless, although a little odd looking.

ahernank commented 4 months ago

Thanks @leehart, yup, agree with your plan.

On the bit involving the blank cells, this is a bit of an ongoing issue - I have a to do item to investigate properly but it seems to be caused by some "recent" versions of our API functions. In case it is of interest, the allele frequencies seem to be good examples to chase (e.g. in https://anopheles-genomic-surveillance.github.io/workshop-7/module-1-op-ir.html, the example for ag3.aa_allele_frequencies() prints four of those cells..