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malonge / RagTag

Tools for fast and flexible genome assembly scaffolding and improvement
MIT License
470 stars 47 forks source link

question of Hi-C to resolve conflicts #189

Open njliangdong opened 1 month ago

njliangdong commented 1 month ago

In the step of

use Hi-C to resolve conflicts

ragtag.py merge -b hic.bam query.fasta out_/.agp other.map.agp

if it's possible to use ONT sequencing data to generate bam files?