[X] My problem is not solved in the Troubleshooting docs
Anaconda default channels
[X] I do NOT use the Anaconda default channels (pkgs/* etc.)
How did you install Mamba?
Micromamba
Search tried in issue tracker
is:issue in:title run
Latest version of Mamba
[X] My problem is not solved with the latest version
Tried in Conda?
I didn't try
Describe your issue
On one of my machines, micromamba run -n <envname> <command> does not produce any output (nor error/warning messages) while working perfectly on all others.
For example, on working machines:
❯ micromamba run -n <envname> black --version
black, 24.2.0 (compiled: no)
Python (CPython) 3.11.8
On the failing one:
❯ micromamba run -n <envname> black --version
This happens for any environment and any command.
The machine where micromamba run fails is fully functional and micromamba works like a charm on it, apart from run calls.
Logs for a successful `run` call:
```
❯ micromamba -vvvvvv run -n black --version
debug libmamba Loading configuration
trace libmamba Compute configurable 'create_base'
trace libmamba Compute configurable 'no_env'
trace libmamba Compute configurable 'no_rc'
trace libmamba Compute configurable 'rc_files'
trace libmamba Compute configurable 'root_prefix'
trace libmamba Get RC files configuration from locations up to HomeDir
trace libmamba Configuration found at '/users/biocomp/tboyer/.mambarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.mamba/mambarc.d'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.mamba/mambarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.mamba/.mambarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/mambarc.d'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/mambarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/.mambarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.condarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.conda/condarc.d'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.conda/condarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.conda/.condarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/../conda/condarc.d'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/../conda/condarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/../conda/.condarc'
trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/.mambarc'
trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/condarc.d'
trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/condarc'
trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/.condarc'
trace libmamba Configuration not found at '/var/lib/conda/.mambarc'
trace libmamba Configuration not found at '/var/lib/conda/condarc.d/'
trace libmamba Configuration not found at '/var/lib/conda/condarc'
trace libmamba Configuration not found at '/var/lib/conda/.condarc'
trace libmamba Configuration not found at '/etc/conda/.mambarc'
trace libmamba Configuration not found at '/etc/conda/condarc.d/'
trace libmamba Configuration not found at '/etc/conda/condarc'
trace libmamba Configuration not found at '/etc/conda/.condarc'
trace libmamba Update configurable 'no_env'
trace libmamba Compute configurable 'envs_dirs'
trace libmamba Compute configurable 'file_specs'
trace libmamba Compute configurable 'spec_file_env_name'
trace libmamba Compute configurable 'env_name'
trace libmamba Compute configurable 'use_target_prefix_fallback'
trace libmamba Compute configurable 'target_prefix'
trace libmamba Get RC files configuration from locations up to TargetPrefix
trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/envs//.mambarc'
trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/envs//condarc.d'
trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/envs//condarc'
trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/envs//.condarc'
trace libmamba Configuration found at '/users/biocomp/tboyer/.mambarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.mamba/mambarc.d'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.mamba/mambarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.mamba/.mambarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/mambarc.d'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/mambarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/.mambarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.condarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.conda/condarc.d'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.conda/condarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.conda/.condarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/../conda/condarc.d'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/../conda/condarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/../conda/.condarc'
trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/.mambarc'
trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/condarc.d'
trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/condarc'
trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/.condarc'
trace libmamba Configuration not found at '/var/lib/conda/.mambarc'
trace libmamba Configuration not found at '/var/lib/conda/condarc.d/'
trace libmamba Configuration not found at '/var/lib/conda/condarc'
trace libmamba Configuration not found at '/var/lib/conda/.condarc'
trace libmamba Configuration not found at '/etc/conda/.mambarc'
trace libmamba Configuration not found at '/etc/conda/condarc.d/'
trace libmamba Configuration not found at '/etc/conda/condarc'
trace libmamba Configuration not found at '/etc/conda/.condarc'
trace libmamba Update configurable 'no_env'
trace libmamba Compute configurable 'relocate_prefix'
trace libmamba Compute configurable 'target_prefix_checks'
trace libmamba Compute configurable 'pkgs_dirs'
trace libmamba Compute configurable 'platform'
trace libmamba Compute configurable 'specs'
trace libmamba Compute configurable 'others_pkg_mgrs_specs'
trace libmamba Compute configurable 'experimental'
trace libmamba Compute configurable 'debug'
trace libmamba Compute configurable 'override_channels_enabled'
trace libmamba Compute configurable 'override_channels'
trace libmamba Compute configurable 'channels'
trace libmamba Compute configurable 'channel_alias'
trace libmamba Compute configurable 'default_channels'
trace libmamba Compute configurable 'custom_channels'
trace libmamba Compute configurable 'custom_multichannels'
trace libmamba Compute configurable 'repodata_use_zst'
trace libmamba Compute configurable 'repodata_has_zst'
trace libmamba Compute configurable 'cacert_path'
trace libmamba Compute configurable 'local_repodata_ttl'
trace libmamba Compute configurable 'offline'
trace libmamba Compute configurable 'ssl_no_revoke'
trace libmamba Compute configurable 'ssl_verify'
trace libmamba Compute configurable 'proxy_servers'
trace libmamba Compute configurable 'remote_connect_timeout_secs'
trace libmamba Compute configurable 'remote_backoff_factor'
trace libmamba Compute configurable 'remote_max_retries'
trace libmamba Compute configurable 'no_channel_priority'
trace libmamba Compute configurable 'strict_channel_priority'
trace libmamba Compute configurable 'channel_priority'
trace libmamba Compute configurable 'explicit_install'
trace libmamba Compute configurable 'no_pin'
trace libmamba Compute configurable 'no_py_pin'
trace libmamba Compute configurable 'add_pip_as_python_dependency'
trace libmamba Compute configurable 'pinned_packages'
trace libmamba Compute configurable 'freeze_installed'
trace libmamba Compute configurable 'force_reinstall'
trace libmamba Compute configurable 'no_deps'
trace libmamba Compute configurable 'only_deps'
trace libmamba Compute configurable 'categories'
trace libmamba Compute configurable 'retry_clean_cache'
trace libmamba Compute configurable 'allow_uninstall'
trace libmamba Compute configurable 'allow_downgrade'
trace libmamba Compute configurable 'download_threads'
trace libmamba Compute configurable 'extract_threads'
trace libmamba Compute configurable 'allow_softlinks'
trace libmamba Compute configurable 'always_copy'
trace libmamba Compute configurable 'always_softlink'
trace libmamba Compute configurable 'shortcuts'
trace libmamba Compute configurable 'safety_checks'
trace libmamba Compute configurable 'extra_safety_checks'
trace libmamba Compute configurable 'verify_artifacts'
trace libmamba Compute configurable 'lock_timeout'
trace libmamba Compute configurable 'use_lockfiles'
trace libmamba Compute configurable 'compile_pyc'
trace libmamba Compute configurable 'always_yes'
trace libmamba Compute configurable 'auto_activate_base'
trace libmamba Compute configurable 'dry_run'
trace libmamba Compute configurable 'download_only'
trace libmamba Compute configurable 'print_config_only'
trace libmamba Compute configurable 'print_context_only'
trace libmamba Compute configurable 'json'
trace libmamba Compute configurable 'verbose'
trace libmamba Compute configurable 'log_level'
trace libmamba Compute configurable 'log_backtrace'
trace libmamba Compute configurable 'log_pattern'
trace libmamba Compute configurable 'changeps1'
trace libmamba Compute configurable 'shell_completion'
trace libmamba Compute configurable 'env_prompt'
trace libmamba Compute configurable 'show_all_configs'
trace libmamba Compute configurable 'show_all_rc_configs'
trace libmamba Compute configurable 'show_config_descriptions'
trace libmamba Compute configurable 'show_config_groups'
trace libmamba Compute configurable 'show_config_long_descriptions'
trace libmamba Compute configurable 'show_config_sources'
trace libmamba Compute configurable 'show_config_values'
trace libmamba Compute configurable 'quiet'
trace libmamba Compute configurable 'override_rc_files'
trace libmamba Compute configurable 'shell_type'
trace libmamba Compute configurable 'prefix_or_name'
trace libmamba Compute configurable 'shell_stack'
trace libmamba Compute configurable 'list_regex'
trace libmamba Compute configurable 'clean_all'
trace libmamba Compute configurable 'clean_index_cache'
trace libmamba Compute configurable 'clean_packages'
trace libmamba Compute configurable 'clean_tarballs'
trace libmamba Compute configurable 'clean_locks'
trace libmamba Compute configurable 'clean_trash'
trace libmamba Compute configurable 'clean_force_pkgs_dirs'
trace libmamba Compute configurable 'config_set_system_path'
trace libmamba Compute configurable 'config_set_env_path'
trace libmamba Compute configurable 'config_set_file_path'
trace libmamba Compute configurable 'config_set_sequence_spec'
trace libmamba Compute configurable 'remove_key'
trace libmamba Compute configurable 'remove'
trace libmamba Compute configurable 'set_value'
trace libmamba Compute configurable 'get_value'
trace libmamba Compute configurable 'constructor_prefix'
trace libmamba Compute configurable 'constructor_extract_conda_pkgs'
trace libmamba Compute configurable 'constructor_extract_tarball'
debug libmamba 110 configurables computed
debug libmamba Currently running processes: [{"command":["exec","nvitop"],"name":"vacuous_nvitop","pid":"14784","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop"],"name":"loud_nvitop","pid":"2030751","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop","-o","0"],"name":"intriguing_nvitop","pid":"2040652","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop","-o","0"],"name":"warm_nvitop","pid":"29912","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop","-o","1"],"name":"boring_nvitop","pid":"5391","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop","-o","2"],"name":"daring_nvitop","pid":"5929","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop","-o","1"],"name":"weird_nvitop","pid":"26008","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop"],"name":"resilient_nvitop","pid":"11972","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop","-o","0"],"name":"focused_nvitop","pid":"1296669","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop"],"name":"great_nvitop","pid":"1302340","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"}]
debug libmamba Remaining args to run as command: exec black --version
debug libmamba Running wrapped script: exec black --version
debug libmamba Locking directory '/users/biocomp/tboyer/.cache/mamba/proc'
trace libmamba Lockfile created at '/users/biocomp/tboyer/.cache/mamba/proc/proc.lock'
debug libmamba Successfully locked
debug libmamba Unlocking '/users/biocomp/tboyer/.cache/mamba/proc'
trace libmamba Removing file '/users/biocomp/tboyer/.cache/mamba/proc/proc.lock'
black, 24.2.0 (compiled: no)
Python (CPython) 3.11.8
debug libmamba Locking directory '/users/biocomp/tboyer/.cache/mamba/proc'
trace libmamba Lockfile created at '/users/biocomp/tboyer/.cache/mamba/proc/proc.lock'
debug libmamba Successfully locked
debug libmamba Unlocking '/users/biocomp/tboyer/.cache/mamba/proc'
trace libmamba Removing file '/users/biocomp/tboyer/.cache/mamba/proc/proc.lock'
```
Logs for a failling `run` call:
```
❯ micromamba -vvvvvvv run -n black --version
debug libmamba Loading configuration
trace libmamba Compute configurable 'create_base'
trace libmamba Compute configurable 'no_env'
trace libmamba Compute configurable 'no_rc'
trace libmamba Compute configurable 'rc_files'
trace libmamba Compute configurable 'root_prefix'
trace libmamba Get RC files configuration from locations up to HomeDir
trace libmamba Configuration found at '/users/biocomp/tboyer/.mambarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.mamba/mambarc.d'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.mamba/mambarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.mamba/.mambarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/mambarc.d'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/mambarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/.mambarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.condarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.conda/condarc.d'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.conda/condarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.conda/.condarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/../conda/condarc.d'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/../conda/condarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/../conda/.condarc'
trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/.mambarc'
trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/condarc.d'
trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/condarc'
trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/.condarc'
trace libmamba Configuration not found at '/var/lib/conda/.mambarc'
trace libmamba Configuration not found at '/var/lib/conda/condarc.d/'
trace libmamba Configuration not found at '/var/lib/conda/condarc'
trace libmamba Configuration not found at '/var/lib/conda/.condarc'
trace libmamba Configuration not found at '/etc/conda/.mambarc'
trace libmamba Configuration not found at '/etc/conda/condarc.d/'
trace libmamba Configuration not found at '/etc/conda/condarc'
trace libmamba Configuration not found at '/etc/conda/.condarc'
trace libmamba Update configurable 'no_env'
trace libmamba Compute configurable 'envs_dirs'
trace libmamba Compute configurable 'file_specs'
trace libmamba Compute configurable 'spec_file_env_name'
trace libmamba Compute configurable 'env_name'
trace libmamba Compute configurable 'use_target_prefix_fallback'
trace libmamba Compute configurable 'target_prefix'
trace libmamba Get RC files configuration from locations up to TargetPrefix
trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/envs//.mambarc'
trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/envs//condarc.d'
trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/envs//condarc'
trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/envs//.condarc'
trace libmamba Configuration found at '/users/biocomp/tboyer/.mambarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.mamba/mambarc.d'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.mamba/mambarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.mamba/.mambarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/mambarc.d'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/mambarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/.mambarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.condarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.conda/condarc.d'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.conda/condarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.conda/.condarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/../conda/condarc.d'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/../conda/condarc'
trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/../conda/.condarc'
trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/.mambarc'
trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/condarc.d'
trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/condarc'
trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/.condarc'
trace libmamba Configuration not found at '/var/lib/conda/.mambarc'
trace libmamba Configuration not found at '/var/lib/conda/condarc.d/'
trace libmamba Configuration not found at '/var/lib/conda/condarc'
trace libmamba Configuration not found at '/var/lib/conda/.condarc'
trace libmamba Configuration not found at '/etc/conda/.mambarc'
trace libmamba Configuration not found at '/etc/conda/condarc.d/'
trace libmamba Configuration not found at '/etc/conda/condarc'
trace libmamba Configuration not found at '/etc/conda/.condarc'
trace libmamba Update configurable 'no_env'
trace libmamba Compute configurable 'relocate_prefix'
trace libmamba Compute configurable 'target_prefix_checks'
trace libmamba Compute configurable 'pkgs_dirs'
trace libmamba Compute configurable 'platform'
trace libmamba Compute configurable 'specs'
trace libmamba Compute configurable 'others_pkg_mgrs_specs'
trace libmamba Compute configurable 'experimental'
trace libmamba Compute configurable 'debug'
trace libmamba Compute configurable 'override_channels_enabled'
trace libmamba Compute configurable 'override_channels'
trace libmamba Compute configurable 'channels'
trace libmamba Compute configurable 'channel_alias'
trace libmamba Compute configurable 'default_channels'
trace libmamba Compute configurable 'custom_channels'
trace libmamba Compute configurable 'custom_multichannels'
trace libmamba Compute configurable 'repodata_use_zst'
trace libmamba Compute configurable 'repodata_has_zst'
trace libmamba Compute configurable 'cacert_path'
trace libmamba Compute configurable 'local_repodata_ttl'
trace libmamba Compute configurable 'offline'
trace libmamba Compute configurable 'ssl_no_revoke'
trace libmamba Compute configurable 'ssl_verify'
trace libmamba Compute configurable 'proxy_servers'
trace libmamba Compute configurable 'remote_connect_timeout_secs'
trace libmamba Compute configurable 'remote_backoff_factor'
trace libmamba Compute configurable 'remote_max_retries'
trace libmamba Compute configurable 'no_channel_priority'
trace libmamba Compute configurable 'strict_channel_priority'
trace libmamba Compute configurable 'channel_priority'
trace libmamba Compute configurable 'explicit_install'
trace libmamba Compute configurable 'no_pin'
trace libmamba Compute configurable 'no_py_pin'
trace libmamba Compute configurable 'add_pip_as_python_dependency'
trace libmamba Compute configurable 'pinned_packages'
trace libmamba Compute configurable 'freeze_installed'
trace libmamba Compute configurable 'force_reinstall'
trace libmamba Compute configurable 'no_deps'
trace libmamba Compute configurable 'only_deps'
trace libmamba Compute configurable 'categories'
trace libmamba Compute configurable 'retry_clean_cache'
trace libmamba Compute configurable 'allow_uninstall'
trace libmamba Compute configurable 'allow_downgrade'
trace libmamba Compute configurable 'download_threads'
trace libmamba Compute configurable 'extract_threads'
trace libmamba Compute configurable 'allow_softlinks'
trace libmamba Compute configurable 'always_copy'
trace libmamba Compute configurable 'always_softlink'
trace libmamba Compute configurable 'shortcuts'
trace libmamba Compute configurable 'safety_checks'
trace libmamba Compute configurable 'extra_safety_checks'
trace libmamba Compute configurable 'verify_artifacts'
trace libmamba Compute configurable 'lock_timeout'
trace libmamba Compute configurable 'use_lockfiles'
trace libmamba Compute configurable 'compile_pyc'
trace libmamba Compute configurable 'always_yes'
trace libmamba Compute configurable 'auto_activate_base'
trace libmamba Compute configurable 'dry_run'
trace libmamba Compute configurable 'download_only'
trace libmamba Compute configurable 'print_config_only'
trace libmamba Compute configurable 'print_context_only'
trace libmamba Compute configurable 'json'
trace libmamba Compute configurable 'verbose'
trace libmamba Compute configurable 'log_level'
trace libmamba Compute configurable 'log_backtrace'
trace libmamba Compute configurable 'log_pattern'
trace libmamba Compute configurable 'changeps1'
trace libmamba Compute configurable 'shell_completion'
trace libmamba Compute configurable 'env_prompt'
trace libmamba Compute configurable 'show_all_configs'
trace libmamba Compute configurable 'show_all_rc_configs'
trace libmamba Compute configurable 'show_config_descriptions'
trace libmamba Compute configurable 'show_config_groups'
trace libmamba Compute configurable 'show_config_long_descriptions'
trace libmamba Compute configurable 'show_config_sources'
trace libmamba Compute configurable 'show_config_values'
trace libmamba Compute configurable 'quiet'
trace libmamba Compute configurable 'override_rc_files'
trace libmamba Compute configurable 'shell_type'
trace libmamba Compute configurable 'prefix_or_name'
trace libmamba Compute configurable 'shell_stack'
trace libmamba Compute configurable 'list_regex'
trace libmamba Compute configurable 'clean_all'
trace libmamba Compute configurable 'clean_index_cache'
trace libmamba Compute configurable 'clean_packages'
trace libmamba Compute configurable 'clean_tarballs'
trace libmamba Compute configurable 'clean_locks'
trace libmamba Compute configurable 'clean_trash'
trace libmamba Compute configurable 'clean_force_pkgs_dirs'
trace libmamba Compute configurable 'config_set_system_path'
trace libmamba Compute configurable 'config_set_env_path'
trace libmamba Compute configurable 'config_set_file_path'
trace libmamba Compute configurable 'config_set_sequence_spec'
trace libmamba Compute configurable 'remove_key'
trace libmamba Compute configurable 'remove'
trace libmamba Compute configurable 'set_value'
trace libmamba Compute configurable 'get_value'
trace libmamba Compute configurable 'constructor_prefix'
trace libmamba Compute configurable 'constructor_extract_conda_pkgs'
trace libmamba Compute configurable 'constructor_extract_tarball'
debug libmamba 110 configurables computed
debug libmamba Currently running processes: [{"command":["exec","nvitop"],"name":"vacuous_nvitop","pid":"14784","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop"],"name":"loud_nvitop","pid":"2030751","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop","-o","0"],"name":"intriguing_nvitop","pid":"2040652","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop","-o","0"],"name":"warm_nvitop","pid":"29912","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop","-o","1"],"name":"boring_nvitop","pid":"5391","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop","-o","2"],"name":"daring_nvitop","pid":"5929","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop","-o","1"],"name":"weird_nvitop","pid":"26008","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop"],"name":"resilient_nvitop","pid":"11972","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop","-o","0"],"name":"focused_nvitop","pid":"1296669","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop"],"name":"great_nvitop","pid":"1302340","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"}]
debug libmamba Remaining args to run as command: exec black --version
debug libmamba Running wrapped script: exec black --version
debug libmamba Locking directory '/users/biocomp/tboyer/.cache/mamba/proc'
trace libmamba Lockfile created at '/users/biocomp/tboyer/.cache/mamba/proc/proc.lock'
debug libmamba Successfully locked
debug libmamba Unlocking '/users/biocomp/tboyer/.cache/mamba/proc'
trace libmamba Removing file '/users/biocomp/tboyer/.cache/mamba/proc/proc.lock'
debug libmamba Locking directory '/users/biocomp/tboyer/.cache/mamba/proc'
trace libmamba Lockfile created at '/users/biocomp/tboyer/.cache/mamba/proc/proc.lock'
debug libmamba Successfully locked
debug libmamba Unlocking '/users/biocomp/tboyer/.cache/mamba/proc'
trace libmamba Removing file '/users/biocomp/tboyer/.cache/mamba/proc/proc.lock'
```
From what I can tell the only difference between these logs is the absence of output.
Troubleshooting docs
Anaconda default channels
How did you install Mamba?
Micromamba
Search tried in issue tracker
is:issue in:title run
Latest version of Mamba
Tried in Conda?
I didn't try
Describe your issue
On one of my machines,
micromamba run -n <envname> <command>
does not produce any output (nor error/warning messages) while working perfectly on all others.For example, on working machines:
On the failing one:
This happens for any environment and any command. The machine where
micromamba run
fails is fully functional andmicromamba
works like a charm on it, apart fromrun
calls.Logs for a successful `run` call:
``` ❯ micromamba -vvvvvv run -nLogs for a failling `run` call:
``` ❯ micromamba -vvvvvvv run -nFrom what I can tell the only difference between these logs is the absence of output.
mamba info / micromamba info
Logs
No response
environment.yml
No response
~/.condarc