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The Fast Cross-Platform Package Manager
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micromamba run does not produce any output #3206

Open WarmongeringBeaver opened 5 months ago

WarmongeringBeaver commented 5 months ago

Troubleshooting docs

Anaconda default channels

How did you install Mamba?

Micromamba

Search tried in issue tracker

is:issue in:title run

Latest version of Mamba

Tried in Conda?

I didn't try

Describe your issue

On one of my machines, micromamba run -n <envname> <command> does not produce any output (nor error/warning messages) while working perfectly on all others.

For example, on working machines:

❯ micromamba run -n <envname> black --version
black, 24.2.0 (compiled: no)
Python (CPython) 3.11.8

On the failing one:

❯ micromamba run -n <envname> black --version

This happens for any environment and any command. The machine where micromamba run fails is fully functional and micromamba works like a charm on it, apart from run calls.

Logs for a successful `run` call: ``` ❯ micromamba -vvvvvv run -n black --version debug libmamba Loading configuration trace libmamba Compute configurable 'create_base' trace libmamba Compute configurable 'no_env' trace libmamba Compute configurable 'no_rc' trace libmamba Compute configurable 'rc_files' trace libmamba Compute configurable 'root_prefix' trace libmamba Get RC files configuration from locations up to HomeDir trace libmamba Configuration found at '/users/biocomp/tboyer/.mambarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.mamba/mambarc.d' trace libmamba Configuration not found at '/users/biocomp/tboyer/.mamba/mambarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.mamba/.mambarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/mambarc.d' trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/mambarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/.mambarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.condarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.conda/condarc.d' trace libmamba Configuration not found at '/users/biocomp/tboyer/.conda/condarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.conda/.condarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/../conda/condarc.d' trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/../conda/condarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/../conda/.condarc' trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/.mambarc' trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/condarc.d' trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/condarc' trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/.condarc' trace libmamba Configuration not found at '/var/lib/conda/.mambarc' trace libmamba Configuration not found at '/var/lib/conda/condarc.d/' trace libmamba Configuration not found at '/var/lib/conda/condarc' trace libmamba Configuration not found at '/var/lib/conda/.condarc' trace libmamba Configuration not found at '/etc/conda/.mambarc' trace libmamba Configuration not found at '/etc/conda/condarc.d/' trace libmamba Configuration not found at '/etc/conda/condarc' trace libmamba Configuration not found at '/etc/conda/.condarc' trace libmamba Update configurable 'no_env' trace libmamba Compute configurable 'envs_dirs' trace libmamba Compute configurable 'file_specs' trace libmamba Compute configurable 'spec_file_env_name' trace libmamba Compute configurable 'env_name' trace libmamba Compute configurable 'use_target_prefix_fallback' trace libmamba Compute configurable 'target_prefix' trace libmamba Get RC files configuration from locations up to TargetPrefix trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/envs//.mambarc' trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/envs//condarc.d' trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/envs//condarc' trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/envs//.condarc' trace libmamba Configuration found at '/users/biocomp/tboyer/.mambarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.mamba/mambarc.d' trace libmamba Configuration not found at '/users/biocomp/tboyer/.mamba/mambarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.mamba/.mambarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/mambarc.d' trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/mambarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/.mambarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.condarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.conda/condarc.d' trace libmamba Configuration not found at '/users/biocomp/tboyer/.conda/condarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.conda/.condarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/../conda/condarc.d' trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/../conda/condarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/../conda/.condarc' trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/.mambarc' trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/condarc.d' trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/condarc' trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/.condarc' trace libmamba Configuration not found at '/var/lib/conda/.mambarc' trace libmamba Configuration not found at '/var/lib/conda/condarc.d/' trace libmamba Configuration not found at '/var/lib/conda/condarc' trace libmamba Configuration not found at '/var/lib/conda/.condarc' trace libmamba Configuration not found at '/etc/conda/.mambarc' trace libmamba Configuration not found at '/etc/conda/condarc.d/' trace libmamba Configuration not found at '/etc/conda/condarc' trace libmamba Configuration not found at '/etc/conda/.condarc' trace libmamba Update configurable 'no_env' trace libmamba Compute configurable 'relocate_prefix' trace libmamba Compute configurable 'target_prefix_checks' trace libmamba Compute configurable 'pkgs_dirs' trace libmamba Compute configurable 'platform' trace libmamba Compute configurable 'specs' trace libmamba Compute configurable 'others_pkg_mgrs_specs' trace libmamba Compute configurable 'experimental' trace libmamba Compute configurable 'debug' trace libmamba Compute configurable 'override_channels_enabled' trace libmamba Compute configurable 'override_channels' trace libmamba Compute configurable 'channels' trace libmamba Compute configurable 'channel_alias' trace libmamba Compute configurable 'default_channels' trace libmamba Compute configurable 'custom_channels' trace libmamba Compute configurable 'custom_multichannels' trace libmamba Compute configurable 'repodata_use_zst' trace libmamba Compute configurable 'repodata_has_zst' trace libmamba Compute configurable 'cacert_path' trace libmamba Compute configurable 'local_repodata_ttl' trace libmamba Compute configurable 'offline' trace libmamba Compute configurable 'ssl_no_revoke' trace libmamba Compute configurable 'ssl_verify' trace libmamba Compute configurable 'proxy_servers' trace libmamba Compute configurable 'remote_connect_timeout_secs' trace libmamba Compute configurable 'remote_backoff_factor' trace libmamba Compute configurable 'remote_max_retries' trace libmamba Compute configurable 'no_channel_priority' trace libmamba Compute configurable 'strict_channel_priority' trace libmamba Compute configurable 'channel_priority' trace libmamba Compute configurable 'explicit_install' trace libmamba Compute configurable 'no_pin' trace libmamba Compute configurable 'no_py_pin' trace libmamba Compute configurable 'add_pip_as_python_dependency' trace libmamba Compute configurable 'pinned_packages' trace libmamba Compute configurable 'freeze_installed' trace libmamba Compute configurable 'force_reinstall' trace libmamba Compute configurable 'no_deps' trace libmamba Compute configurable 'only_deps' trace libmamba Compute configurable 'categories' trace libmamba Compute configurable 'retry_clean_cache' trace libmamba Compute configurable 'allow_uninstall' trace libmamba Compute configurable 'allow_downgrade' trace libmamba Compute configurable 'download_threads' trace libmamba Compute configurable 'extract_threads' trace libmamba Compute configurable 'allow_softlinks' trace libmamba Compute configurable 'always_copy' trace libmamba Compute configurable 'always_softlink' trace libmamba Compute configurable 'shortcuts' trace libmamba Compute configurable 'safety_checks' trace libmamba Compute configurable 'extra_safety_checks' trace libmamba Compute configurable 'verify_artifacts' trace libmamba Compute configurable 'lock_timeout' trace libmamba Compute configurable 'use_lockfiles' trace libmamba Compute configurable 'compile_pyc' trace libmamba Compute configurable 'always_yes' trace libmamba Compute configurable 'auto_activate_base' trace libmamba Compute configurable 'dry_run' trace libmamba Compute configurable 'download_only' trace libmamba Compute configurable 'print_config_only' trace libmamba Compute configurable 'print_context_only' trace libmamba Compute configurable 'json' trace libmamba Compute configurable 'verbose' trace libmamba Compute configurable 'log_level' trace libmamba Compute configurable 'log_backtrace' trace libmamba Compute configurable 'log_pattern' trace libmamba Compute configurable 'changeps1' trace libmamba Compute configurable 'shell_completion' trace libmamba Compute configurable 'env_prompt' trace libmamba Compute configurable 'show_all_configs' trace libmamba Compute configurable 'show_all_rc_configs' trace libmamba Compute configurable 'show_config_descriptions' trace libmamba Compute configurable 'show_config_groups' trace libmamba Compute configurable 'show_config_long_descriptions' trace libmamba Compute configurable 'show_config_sources' trace libmamba Compute configurable 'show_config_values' trace libmamba Compute configurable 'quiet' trace libmamba Compute configurable 'override_rc_files' trace libmamba Compute configurable 'shell_type' trace libmamba Compute configurable 'prefix_or_name' trace libmamba Compute configurable 'shell_stack' trace libmamba Compute configurable 'list_regex' trace libmamba Compute configurable 'clean_all' trace libmamba Compute configurable 'clean_index_cache' trace libmamba Compute configurable 'clean_packages' trace libmamba Compute configurable 'clean_tarballs' trace libmamba Compute configurable 'clean_locks' trace libmamba Compute configurable 'clean_trash' trace libmamba Compute configurable 'clean_force_pkgs_dirs' trace libmamba Compute configurable 'config_set_system_path' trace libmamba Compute configurable 'config_set_env_path' trace libmamba Compute configurable 'config_set_file_path' trace libmamba Compute configurable 'config_set_sequence_spec' trace libmamba Compute configurable 'remove_key' trace libmamba Compute configurable 'remove' trace libmamba Compute configurable 'set_value' trace libmamba Compute configurable 'get_value' trace libmamba Compute configurable 'constructor_prefix' trace libmamba Compute configurable 'constructor_extract_conda_pkgs' trace libmamba Compute configurable 'constructor_extract_tarball' debug libmamba 110 configurables computed debug libmamba Currently running processes: [{"command":["exec","nvitop"],"name":"vacuous_nvitop","pid":"14784","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop"],"name":"loud_nvitop","pid":"2030751","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop","-o","0"],"name":"intriguing_nvitop","pid":"2040652","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop","-o","0"],"name":"warm_nvitop","pid":"29912","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop","-o","1"],"name":"boring_nvitop","pid":"5391","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop","-o","2"],"name":"daring_nvitop","pid":"5929","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop","-o","1"],"name":"weird_nvitop","pid":"26008","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop"],"name":"resilient_nvitop","pid":"11972","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop","-o","0"],"name":"focused_nvitop","pid":"1296669","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop"],"name":"great_nvitop","pid":"1302340","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"}] debug libmamba Remaining args to run as command: exec black --version debug libmamba Running wrapped script: exec black --version debug libmamba Locking directory '/users/biocomp/tboyer/.cache/mamba/proc' trace libmamba Lockfile created at '/users/biocomp/tboyer/.cache/mamba/proc/proc.lock' debug libmamba Successfully locked debug libmamba Unlocking '/users/biocomp/tboyer/.cache/mamba/proc' trace libmamba Removing file '/users/biocomp/tboyer/.cache/mamba/proc/proc.lock' black, 24.2.0 (compiled: no) Python (CPython) 3.11.8 debug libmamba Locking directory '/users/biocomp/tboyer/.cache/mamba/proc' trace libmamba Lockfile created at '/users/biocomp/tboyer/.cache/mamba/proc/proc.lock' debug libmamba Successfully locked debug libmamba Unlocking '/users/biocomp/tboyer/.cache/mamba/proc' trace libmamba Removing file '/users/biocomp/tboyer/.cache/mamba/proc/proc.lock' ```
Logs for a failling `run` call: ``` ❯ micromamba -vvvvvvv run -n black --version debug libmamba Loading configuration trace libmamba Compute configurable 'create_base' trace libmamba Compute configurable 'no_env' trace libmamba Compute configurable 'no_rc' trace libmamba Compute configurable 'rc_files' trace libmamba Compute configurable 'root_prefix' trace libmamba Get RC files configuration from locations up to HomeDir trace libmamba Configuration found at '/users/biocomp/tboyer/.mambarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.mamba/mambarc.d' trace libmamba Configuration not found at '/users/biocomp/tboyer/.mamba/mambarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.mamba/.mambarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/mambarc.d' trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/mambarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/.mambarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.condarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.conda/condarc.d' trace libmamba Configuration not found at '/users/biocomp/tboyer/.conda/condarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.conda/.condarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/../conda/condarc.d' trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/../conda/condarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/../conda/.condarc' trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/.mambarc' trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/condarc.d' trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/condarc' trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/.condarc' trace libmamba Configuration not found at '/var/lib/conda/.mambarc' trace libmamba Configuration not found at '/var/lib/conda/condarc.d/' trace libmamba Configuration not found at '/var/lib/conda/condarc' trace libmamba Configuration not found at '/var/lib/conda/.condarc' trace libmamba Configuration not found at '/etc/conda/.mambarc' trace libmamba Configuration not found at '/etc/conda/condarc.d/' trace libmamba Configuration not found at '/etc/conda/condarc' trace libmamba Configuration not found at '/etc/conda/.condarc' trace libmamba Update configurable 'no_env' trace libmamba Compute configurable 'envs_dirs' trace libmamba Compute configurable 'file_specs' trace libmamba Compute configurable 'spec_file_env_name' trace libmamba Compute configurable 'env_name' trace libmamba Compute configurable 'use_target_prefix_fallback' trace libmamba Compute configurable 'target_prefix' trace libmamba Get RC files configuration from locations up to TargetPrefix trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/envs//.mambarc' trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/envs//condarc.d' trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/envs//condarc' trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/envs//.condarc' trace libmamba Configuration found at '/users/biocomp/tboyer/.mambarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.mamba/mambarc.d' trace libmamba Configuration not found at '/users/biocomp/tboyer/.mamba/mambarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.mamba/.mambarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/mambarc.d' trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/mambarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/.mambarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.condarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.conda/condarc.d' trace libmamba Configuration not found at '/users/biocomp/tboyer/.conda/condarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.conda/.condarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/../conda/condarc.d' trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/../conda/condarc' trace libmamba Configuration not found at '/users/biocomp/tboyer/.config/mamba/../conda/.condarc' trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/.mambarc' trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/condarc.d' trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/condarc' trace libmamba Configuration not found at '/import/bc_users/biocomp/tboyer/micromamba/.condarc' trace libmamba Configuration not found at '/var/lib/conda/.mambarc' trace libmamba Configuration not found at '/var/lib/conda/condarc.d/' trace libmamba Configuration not found at '/var/lib/conda/condarc' trace libmamba Configuration not found at '/var/lib/conda/.condarc' trace libmamba Configuration not found at '/etc/conda/.mambarc' trace libmamba Configuration not found at '/etc/conda/condarc.d/' trace libmamba Configuration not found at '/etc/conda/condarc' trace libmamba Configuration not found at '/etc/conda/.condarc' trace libmamba Update configurable 'no_env' trace libmamba Compute configurable 'relocate_prefix' trace libmamba Compute configurable 'target_prefix_checks' trace libmamba Compute configurable 'pkgs_dirs' trace libmamba Compute configurable 'platform' trace libmamba Compute configurable 'specs' trace libmamba Compute configurable 'others_pkg_mgrs_specs' trace libmamba Compute configurable 'experimental' trace libmamba Compute configurable 'debug' trace libmamba Compute configurable 'override_channels_enabled' trace libmamba Compute configurable 'override_channels' trace libmamba Compute configurable 'channels' trace libmamba Compute configurable 'channel_alias' trace libmamba Compute configurable 'default_channels' trace libmamba Compute configurable 'custom_channels' trace libmamba Compute configurable 'custom_multichannels' trace libmamba Compute configurable 'repodata_use_zst' trace libmamba Compute configurable 'repodata_has_zst' trace libmamba Compute configurable 'cacert_path' trace libmamba Compute configurable 'local_repodata_ttl' trace libmamba Compute configurable 'offline' trace libmamba Compute configurable 'ssl_no_revoke' trace libmamba Compute configurable 'ssl_verify' trace libmamba Compute configurable 'proxy_servers' trace libmamba Compute configurable 'remote_connect_timeout_secs' trace libmamba Compute configurable 'remote_backoff_factor' trace libmamba Compute configurable 'remote_max_retries' trace libmamba Compute configurable 'no_channel_priority' trace libmamba Compute configurable 'strict_channel_priority' trace libmamba Compute configurable 'channel_priority' trace libmamba Compute configurable 'explicit_install' trace libmamba Compute configurable 'no_pin' trace libmamba Compute configurable 'no_py_pin' trace libmamba Compute configurable 'add_pip_as_python_dependency' trace libmamba Compute configurable 'pinned_packages' trace libmamba Compute configurable 'freeze_installed' trace libmamba Compute configurable 'force_reinstall' trace libmamba Compute configurable 'no_deps' trace libmamba Compute configurable 'only_deps' trace libmamba Compute configurable 'categories' trace libmamba Compute configurable 'retry_clean_cache' trace libmamba Compute configurable 'allow_uninstall' trace libmamba Compute configurable 'allow_downgrade' trace libmamba Compute configurable 'download_threads' trace libmamba Compute configurable 'extract_threads' trace libmamba Compute configurable 'allow_softlinks' trace libmamba Compute configurable 'always_copy' trace libmamba Compute configurable 'always_softlink' trace libmamba Compute configurable 'shortcuts' trace libmamba Compute configurable 'safety_checks' trace libmamba Compute configurable 'extra_safety_checks' trace libmamba Compute configurable 'verify_artifacts' trace libmamba Compute configurable 'lock_timeout' trace libmamba Compute configurable 'use_lockfiles' trace libmamba Compute configurable 'compile_pyc' trace libmamba Compute configurable 'always_yes' trace libmamba Compute configurable 'auto_activate_base' trace libmamba Compute configurable 'dry_run' trace libmamba Compute configurable 'download_only' trace libmamba Compute configurable 'print_config_only' trace libmamba Compute configurable 'print_context_only' trace libmamba Compute configurable 'json' trace libmamba Compute configurable 'verbose' trace libmamba Compute configurable 'log_level' trace libmamba Compute configurable 'log_backtrace' trace libmamba Compute configurable 'log_pattern' trace libmamba Compute configurable 'changeps1' trace libmamba Compute configurable 'shell_completion' trace libmamba Compute configurable 'env_prompt' trace libmamba Compute configurable 'show_all_configs' trace libmamba Compute configurable 'show_all_rc_configs' trace libmamba Compute configurable 'show_config_descriptions' trace libmamba Compute configurable 'show_config_groups' trace libmamba Compute configurable 'show_config_long_descriptions' trace libmamba Compute configurable 'show_config_sources' trace libmamba Compute configurable 'show_config_values' trace libmamba Compute configurable 'quiet' trace libmamba Compute configurable 'override_rc_files' trace libmamba Compute configurable 'shell_type' trace libmamba Compute configurable 'prefix_or_name' trace libmamba Compute configurable 'shell_stack' trace libmamba Compute configurable 'list_regex' trace libmamba Compute configurable 'clean_all' trace libmamba Compute configurable 'clean_index_cache' trace libmamba Compute configurable 'clean_packages' trace libmamba Compute configurable 'clean_tarballs' trace libmamba Compute configurable 'clean_locks' trace libmamba Compute configurable 'clean_trash' trace libmamba Compute configurable 'clean_force_pkgs_dirs' trace libmamba Compute configurable 'config_set_system_path' trace libmamba Compute configurable 'config_set_env_path' trace libmamba Compute configurable 'config_set_file_path' trace libmamba Compute configurable 'config_set_sequence_spec' trace libmamba Compute configurable 'remove_key' trace libmamba Compute configurable 'remove' trace libmamba Compute configurable 'set_value' trace libmamba Compute configurable 'get_value' trace libmamba Compute configurable 'constructor_prefix' trace libmamba Compute configurable 'constructor_extract_conda_pkgs' trace libmamba Compute configurable 'constructor_extract_tarball' debug libmamba 110 configurables computed debug libmamba Currently running processes: [{"command":["exec","nvitop"],"name":"vacuous_nvitop","pid":"14784","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop"],"name":"loud_nvitop","pid":"2030751","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop","-o","0"],"name":"intriguing_nvitop","pid":"2040652","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop","-o","0"],"name":"warm_nvitop","pid":"29912","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop","-o","1"],"name":"boring_nvitop","pid":"5391","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop","-o","2"],"name":"daring_nvitop","pid":"5929","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop","-o","1"],"name":"weird_nvitop","pid":"26008","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop"],"name":"resilient_nvitop","pid":"11972","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop","-o","0"],"name":"focused_nvitop","pid":"1296669","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"},{"command":["exec","nvitop"],"name":"great_nvitop","pid":"1302340","prefix":"/import/bc_users/biocomp/tboyer/micromamba/envs/nvitop"}] debug libmamba Remaining args to run as command: exec black --version debug libmamba Running wrapped script: exec black --version debug libmamba Locking directory '/users/biocomp/tboyer/.cache/mamba/proc' trace libmamba Lockfile created at '/users/biocomp/tboyer/.cache/mamba/proc/proc.lock' debug libmamba Successfully locked debug libmamba Unlocking '/users/biocomp/tboyer/.cache/mamba/proc' trace libmamba Removing file '/users/biocomp/tboyer/.cache/mamba/proc/proc.lock' debug libmamba Locking directory '/users/biocomp/tboyer/.cache/mamba/proc' trace libmamba Lockfile created at '/users/biocomp/tboyer/.cache/mamba/proc/proc.lock' debug libmamba Successfully locked debug libmamba Unlocking '/users/biocomp/tboyer/.cache/mamba/proc' trace libmamba Removing file '/users/biocomp/tboyer/.cache/mamba/proc/proc.lock' ```

From what I can tell the only difference between these logs is the absence of output.

mamba info / micromamba info

libmamba version : 1.5.6
     micromamba version : 1.5.6
           curl version : libcurl/8.5.0 OpenSSL/3.2.0 zlib/1.2.13 zstd/1.5.5 libssh2/1.11.0 nghttp2/1.58.0
     libarchive version : libarchive 3.7.2 zlib/1.2.13 bz2lib/1.0.8 libzstd/1.5.5
       envs directories : /import/bc_users/biocomp/tboyer/micromamba/envs
          package cache : /import/bc_users/biocomp/tboyer/micromamba/pkgs
                          /import/bc_users/biocomp/tboyer/.mamba/pkgs
            environment : None (not found)
           env location : -
      user config files : /users/biocomp/tboyer/.mambarc
 populated config files : /users/biocomp/tboyer/.mambarc
       virtual packages : __unix=0=0
                          __linux=5.4.0=0
                          __glibc=2.31=0
                          __archspec=1=x86_64-v3
                          __cuda=11.6=0
               channels : https://conda.anaconda.org/conda-forge/linux-64
                          https://conda.anaconda.org/conda-forge/noarch
       base environment : /import/bc_users/biocomp/tboyer/micromamba
               platform : linux-64

Logs

No response

environment.yml

No response

~/.condarc

channels:
  - conda-forge