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mandricigor / imrep

ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.
https://mandricigor.github.io/imrep/
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TRG #14

Closed smangul1 closed 7 years ago

smangul1 commented 7 years ago

please add number of TRG CDR3 reported as well

Serghei

mandricigor commented 7 years ago

Please explain

On Sat, 25 Mar 2017, 14:28 Serghei Mangul, notifications@github.com wrote:

please add number of TRG CDR3 reported as well

Serghei

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smangul1 commented 7 years ago

in this report you don't have TRG chain

843 full CDR3 found:

Only TRA, TRB, TRD

mandricigor commented 7 years ago

I show just non zero ones

On Sat, 25 Mar 2017, 14:34 Serghei Mangul, notifications@github.com wrote:

in this report you don't have TRG chain

843 full CDR3 found:

-

355 of type TRA

11 of type TRB

2 of type TRD

37 of type IGL

29 of type IGK

409 of type IGH

Only TRA, TRB, TRD

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smangul1 commented 7 years ago

Please change to add zeros as well

Otherwise it is confusing

mandricigor commented 7 years ago

Updated.