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mandricigor / imrep

ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.
https://mandricigor.github.io/imrep/
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bug #20

Open smangul1 opened 7 years ago

smangul1 commented 7 years ago

Hi Igor,

This is the bug i have noticed

CQQYGRGSTF IGH 2 TRDV3,TRAV12,TRAV13 NA TRDV3,TRAV12,TRAV13

column 2 says it is IGH but this is actually TRD

Serghei

smangul1 commented 7 years ago

/u/home/s/serghei/project/imrep_gtex/validation/BCR-Seq/imrep/SRR5248346.cdr3

the file containing that line

mandricigor commented 7 years ago

It would be good to have input data so that I can reproduce the bug... It is very hard to understand the problem looking at the output...