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manuel-munoz-aguirre / PyHIST

A pipeline to segment tissue from the background in histological images
GNU General Public License v3.0
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Step takes too much memory #14

Closed manuel-munoz-aguirre closed 4 years ago

manuel-munoz-aguirre commented 5 years ago

This step takes too much memory! It will crash on some computers. Why are the output ppm files so large? We should see if there's a way to limit how memory swapping happens

https://github.com/manuel-munoz-aguirre/HistologySegment/blob/a352d555c400a851081b242b94512b43aedad8e7/segment_hist#L385

See: https://stackoverflow.com/questions/48423113/imagemagick-convert-out-of-memory

manuel-munoz-aguirre commented 4 years ago

Implemented deepzoom