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mapleforest / HaploMerger2

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The genome size of Haplotype is still larger than expected size? #26

Open yilunhuangyue opened 5 years ago

yilunhuangyue commented 5 years ago

Hi, Thanks for you software first. I am assembling a high heterozygous diploid genome. The expected genome size is about 300M and I got the raw assembly of about 600M due to heterozygous regions. I used Haplomerger2 to construct haplotypes, but the haplotype A and B were both about 500M. How could I adjust the parameters to fit my genome? Thanks a lot.