Retrieving link between input and output sequences

marbl / MHAP

MinHash Alignment Process (MHAP, pronounced MAP): locality-sensitive hashing to detect long-read overlaps and utilities

Apache License 2.0

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Closed chklopp closed 8 years ago

chklopp commented 8 years ago

Hi,

Could MHAP produce a file linking input and output read names?

Cheers,

Christophe

konstantinberlin commented 8 years ago

Are you talking about when using binary files vs. text files as input?

chklopp commented 8 years ago

No, I would like to have the correspondence between corrected and input reads.

konstantinberlin commented 8 years ago

MHAP doesn't do correction, it is an overlapper only. Are you talking about PBcR or CANU? In that case you should submit that issue there.

chklopp commented 8 years ago

PBcR.

konstantinberlin commented 8 years ago

Ok great.