marbl / VALET

A pipeline for detecting mis-assemblies in metagenomic assemblies.
MIT License
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Assembly correction #9

Open SilasK opened 6 years ago

SilasK commented 6 years ago

Hello,

Are you continue to develop VALET? I haven't seen any publication for it yet only the thesis. Do you think it is possible to use VALET automatically correct assembly? This will mean mostly split an assembly at a breakpoint and may be at the edges of low-density regions.

Did you do a systematic review of the misassemblies detected by quast and VALET? I would like to contribute.

Kind regards Silas Kieser