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marbl / verkko

Telomere-to-telomere assembly of accurate long reads (PacBio HiFi, Oxford Nanopore Duplex, HERRO corrected Oxford Nanopore Simplex) and Oxford Nanopore ultra-long reads.
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more explicit crashes information #222

Closed Dmitry-Antipov closed 8 months ago

Dmitry-Antipov commented 9 months ago

It's not simple to get useful info from the snakemake's log for the crashed verkko runs. Possibly add some postprocessing in verkko.sh that explicitly shows last crashed script; it's jobid and err log location?

Dmitry-Antipov commented 9 months ago

@brianwalenz

Dmitry-Antipov commented 8 months ago

Same thing with more info in https://github.com/marbl/verkko/issues/228