Running MitoHiFi starting from reads vs contigs

marcelauliano / MitoHiFi

Find, circularise and annotate mitogenome from PacBio assemblies

MIT License

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Running MitoHiFi starting from reads vs contigs #85

Open ramiroricardo opened 8 months ago

ramiroricardo commented 8 months ago

Dear all,

We are starting to run MitoHiFi for haploid fungal genomes and we were wondering if there is any rationale that would make it better to start from contigs or from reads?

Best,

Ricardo Ramiro