marcnol / pyHiM

Multiplexed DNA-FISH data analysis pipeline
GNU Lesser General Public License v3.0
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RT Legend for Trace_3D_barcode_mask:[...]_ROI:[...]_traces_XYZ_ROI[...].png #150

Open MarionBardou opened 1 year ago

MarionBardou commented 1 year ago

For the following pyHiM output, it might be nice to know which RT correspond to which color

image

marcnol commented 10 months ago

maybe good to add option in plots_traces within the chromatin_trace_table class so plot a subset of barcodes. Then modify trace_analyzer.py to provide as an option this list of barcodes...