Provide a template or a generator for a bash script to run pyHiM with multiple ROI

marcnol / pyHiM

Multiplexed DNA-FISH data analysis pipeline

GNU Lesser General Public License v3.0

4 stars 2 forks source link

Provide a template or a generator for a bash script to run pyHiM with multiple ROI #170

Open XDevos opened 1 year ago

XDevos commented 1 year ago

This ticket is linked with: #142

The idea is to recycle the python script runHiM_cluster.py (src/toolbox/) to generate a bash script for personnal computer or slurm srun job for cluster.