marcnol / pyHiM

Multiplexed DNA-FISH data analysis pipeline
GNU Lesser General Public License v3.0
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nan issue => build_matrix #203

Open MarionBardou opened 8 months ago

MarionBardou commented 8 months ago

image

This message arise while building the distances histograms figure in build_matrix. It appears for matrices that are almost empty. Strangely, this phenomenon often happen for the first ROI of almost all my experiments. We tried to look at it with Xavier but the projections, the alignment, the mask segmentation and the bacodes localizations seem fine. An example of the issue can be find there : /mnt/grey/DATA/AnalyzedData_2023/Experiment_47_Marion_c739_sNPF_rut/rut_c739_rep1/