marcnol / pyHiM

Multiplexed DNA-FISH data analysis pipeline
GNU Lesser General Public License v3.0
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trace_merge.py | Add a label parameter #231

Closed MarionBardou closed 7 months ago

MarionBardou commented 7 months ago

To combine traces, I used to use trace_combinator.py . Now, I think the code that is mainly used to combine traces is trace_merge.py. With trace_combinator.py, I can specify a label for the combination. My issue is that it is not the case for trace_merge.py (I can either change the ouput file name or the output directory). Do you think it could be possible to add a label parameter ? Thank you

marcnol commented 7 months ago

there is a different script for this:

https://pyhim.readthedocs.io/en/latest/user_guide/modules/building_traces/trace_assign_mask.html

On Thu, Nov 30, 2023 at 12:26 PM MarionBardou @.***> wrote:

To combine traces, I used to use trace_combinator.py . Now, I think the code that is mainly used to combine traces is trace_merge.py. With trace_combinator.py, I can specify a label for the combination. My issue is that it is not the case for trace_merge.py (I can either change the ouput file name or the output directory). Do you think it could be possible to add a label parameter ? Thank you

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