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ADMIXTURE for multiple K values in a circle #6

Closed josephresearcher closed 2 years ago

josephresearcher commented 2 years ago

Hello Please give an example to run plots for ADMIXTURE for multiple K values in a circle Thanks

capemaster commented 2 years ago

Dear Joseph, there is an help for each function. Anyway, in case you missed it, the following code can be applied.

membercoeff.circos(in.file = "FilenameWithNoExtension",
                   maxK = 21,
                   K.to.plot = c(2:21),
                   pop.order.file = "poporder",
                   id.order.file = "idorder")

Flags are self explanatory. K numbers depend on your analysis. Hope this helps.