marcos-diazg / musica

MuSiCa - Mutational Signatures in Cancer
https://www.clinicbarcelona.org/en/idibaps/research-areas/liver-digestive-system-and-metabolism/genetic-predisposition-to-gastrointestinal-cancer/tools
MIT License
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extendShinyjs error #49

Closed mkazanov closed 10 months ago

mkazanov commented 11 months ago

In bowser:

An error has occurred! shinyjs: extendShinyjs: functions argument must not contain any of the following function names: refresh

In command line:

$ echo 'shiny::runApp()' | Rscript - Loading required package: shiny

Listening on http://127.0.0.1:5351

Attaching package: ‘shinysky’

The following object is masked from ‘package:shiny’:

actionButton

Attaching package: ‘shinyjs’

The following object is masked from ‘package:shiny’:

runExample

The following objects are masked from ‘package:methods’:

removeClass, show

Using V8 engine 8.9.83 Loading required package: ggplot2

Attaching package: ‘plotly’

The following object is masked from ‘package:ggplot2’:

last_plot

The following object is masked from ‘package:stats’:

filter

The following object is masked from ‘package:graphics’:

layout

Warning: Error in : shinyjs: extendShinyjs: functions argument must not contain any of the following function names: refresh 70: stop 69: errMsg 68: shinyjs::extendShinyjs 1: shiny::runApp Warning: Error in : shinyjs: extendShinyjs: functions argument must not contain any of the following function names: refresh 70: stop 69: errMsg 68: shinyjs::extendShinyjs 1: shiny::runApp

marcos-diazg commented 10 months ago

Dear @mkazanov,

Thanks for your interest in our tool, and sorry for the delay in getting back to you. Please feel free to use our new tool, SigProfilerAssignment, which is available here: https://cancer.sanger.ac.uk/signatures/assignment/, and has been recently published: https://doi.org/10.1093/bioinformatics/btad756. Unfortunately, we are no longer supporting our legacy MuSiCa tool. Also, feel free to reach out to me by email (mdiazgay@ucsd.edu) if you have any further questions.

Best wishes,

Marcos