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mariachiara-github / PacBio-analysis

Analysis of long read RNAseq data for the identification of fusion transcripts
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visualize_fusion.py #1

Open tky199996 opened 4 months ago

tky199996 commented 4 months ago

Hello, I have encountered the same problem of visualization fusion as you before, I wonder if you have solved the problem of visualization? I hope we can keep in touch and solve this problem together.

mariachiara-github commented 4 months ago

Hello, I have encountered the same problem of visualization fusion as you before, I wonder if you have solved the problem of visualization? I hope we can keep in touch and solve this problem together.

Hi! The problem I had has not been solved yet, I think they are still working on it, I'll let you know when I have some news! Also, they updated the visualize.py script solving some bugs, so you might want to try using the new script to see if it solves your problem

tky199996 commented 1 month ago

你好，我之前也遇到过跟你一样的可视化融合问题，不知道你现在解决了可视化的问题吗？希望我们能保持联系，一起解决这个问题。

嗨！我遇到的问题还没有解决，我想他们还在努力，如果有消息我会告诉你的！此外，他们更新了 visualize.py 脚本，解决了一些错误，所以你可能想尝试使用新脚本看看它是否能解决你的问题 Hello, I would like to know if your problem has been solved. I have the same problem as you. The error shows ValueError: min() arg is an empty sequence. I really need to visualize my fusion gene. Do you have any good visualization method? Thank you for your help.

mariachiara-github commented 1 month ago

你好，我之前也遇到过跟你一样的可视化融合问题，不知道你现在解决了可视化的问题吗？希望我们能保持联系，一起解决这个问题。

嗨！我遇到的问题还没有解决，我想他们还在努力，如果有消息我会告诉你的！此外，他们更新了 visualize.py 脚本，解决了一些错误，所以你可能想尝试使用新脚本看看它是否能解决你的问题 Hello, I would like to know if your problem has been solved. I have the same problem as you. The error shows ValueError: min() arg is an empty sequence. I really need to visualize my fusion gene. Do you have any good visualization method? Thank you for your help.

Hi! So sorry for the late reply! Unfortunately, my problem has not been solved ... the issue is still open and I was not able to fix it by myself