markovmodel / PyEMMA

🚂 Python API for Emma's Markov Model Algorithms 🚂
http://pyemma.org
GNU Lesser General Public License v3.0
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its showing runtime error #1597

Open Gourav-Chakraborty opened 1 year ago

Gourav-Chakraborty commented 1 year ago

The PROBLEM WHICH I FACED

RuntimeError: An attempt has been made to start a new process before the current process has finished its bootstrapping phase.

    This probably means that you are not using fork to start your
    child processes and you have forgotten to use the proper idiom
    in the main module:

        if __name__ == '__main__':
            freeze_support()
            ...

    The "freeze_support()" line can be omitted if the program
    is not going to be frozen to produce an executable.

I have completed the featurization, tica and discretization. The above error was encountered when I was running the implied timescales command to check for the appropriate timescale for my system. I am also attaching the python script for the entire timeline. Kindly let me know the mistake which I am making here.

CONDA LIBRARIES conda_list.txt

PYEMMA VERSION 2.5.12

PYTHON SCRIPT FOR MSM msm2.txt

Gourav-Chakraborty commented 1 year ago

I am attaching the entire output file showing the progress of the script (renamed from nohup.out to nohup.txt). nohup.txt