markovmodel / PyEMMA

🚂 Python API for Emma's Markov Model Algorithms 🚂
http://pyemma.org
GNU Lesser General Public License v3.0
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Are Unbiased Trajectories Required for dTRAM PMF profile estimations #1601

Open Cal-JWRW opened 1 year ago

Cal-JWRW commented 1 year ago

I am using the estimate_umbrella_sampling function with the dtram estimator in order to get an unbiased PMF profile for an umbrella sampling study of membrane permeation. I would like to check the implied timescales in order to select a suitable lagtime for this process. Is there anyway to do this without access to a corresponding set of unbiased simulations?