markovmodel / deeptime

Deep learning meets molecular dynamics.
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(1.5 * r - 2.0) * rvec / rnorm in line 84 of vampnet/vampnet /data_generator.py #36

Open gongshuai0606 opened 1 year ago

gongshuai0606 commented 1 year ago

Isn't the gradient (1.5 r - 2.0) rvec / rnorm in line 84 of vampnet/vampnet /data_generator.py supposed to be the (1.5 * r*2 - 2.0r) * rvec / rnorm according to the potential energy function of Protein-folding model "U(r) = 0.5(r-3)^3 - (r-3)^2 for r>3" of paper "VAMPnets for deep learning of molecular kinetics"?