markovmodel / msmtools

Tools for estimating and analyzing Markov state models
GNU Lesser General Public License v3.0
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eigensolver broken for Python 3.5 and Numpy 1.9 #103

Closed marscher closed 7 years ago

marscher commented 7 years ago

https://travis-ci.org/markovmodel/msmtools/jobs/254465976

Summary: The eigensolver does not fulfil the tests for sparse and dense RDL decomposition (stationary distribution from eigenvector as well). The abbreviation is very large for the sparse code (10 orders of magnitude).

This is actually a minor issue, since NumPy 1.9 is fairly outdated and not supported by either Omnia nor Conda-forge. However people compiling the software them self could potentially run into this. So this issue is for the record only, as we can not fix it our selfs.