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markovmodel / pyemma-workshop

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Error when using the TICA function #22

Open Wencesgiovanni opened 1 year ago

Wencesgiovanni commented 1 year ago

Hello, I am following some tutorials for the implementation of TICA, to do a dimension reduction, but I have the following problem;

AttributeError: module 'numpy' has no attribute 'bool'. np.bool was a deprecated alias for the builtin bool. To avoid this error in existing code, use bool by itself. Doing this will not modify any behavior and is safe. If you specifically wanted the numpy scalar type, use np.bool_ here. The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations

I've already updated numpy, but I still get the same error.

clonker commented 1 year ago

Hi, sorry this is a long-standing issue and the project is no longer actively maintained - I personally lack the time for it and decided to focus my efforts on deeptime, which offers tools like TICA as well and should be fully compatible to modern numpy.