Use multiple jobs in Bayesian ITS estimations

markovmodel / pyemma_tutorials

How to analyze molecular dynamics data with PyEMMA

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Use multiple jobs in Bayesian ITS estimations #55

Closed cwehmeyer closed 6 years ago

cwehmeyer commented 6 years ago

This PR provides as much speedup through parallelisation as PyEMMA supports at the moment. Once the cktestmethod of a Bayesian MSM/HMM supports n_jobs=None, additional speedup can be achieved.

cwehmeyer commented 6 years ago

The cktest for a Bayesian model in 06 failed again (timeout >10min) as well as the last cell in 07 (timeout too).