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markovmodel / pyemma_tutorials

How to analyze molecular dynamics data with PyEMMA
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Notebook 3 #64

Closed franknoe closed 6 years ago

franknoe commented 6 years ago

Notebook 3 has some very long code blocks. It would be better to break that down into pieces.

Also NB3 introduces the save/load function at the end. One way to reduce the size of blocks would be to use that functionality earlier and reuse previously saved discretizations etc.

cwehmeyer commented 6 years ago

One way to reduce the size of blocks would be to use that functionality earlier and reuse previously saved discretizations etc.

Yes, but then we need people to run the notebooks exactly in order.We also miss out the opportunity for repetition which would help memorising common tasks.