Closed amvondras closed 2 years ago
@amvondras
I don't know what statistical test you would want to do here, because even if replicates, you expect variability.
But, would a plot be useful, like a pairs() plot of the ASM scores across your replicates?
Mark
I computed ASM scores for tuples in three samples.
I'm interested in knowing whether ASM is detected consistently across these replicates. Can you recommend a way to compute a test statistic for ASM in addition to the ASM score (rather than subsequently testing for gain or loss of ASM with find_dames)?