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markziemann / dee2

Digital Expression Explorer 2 (DEE2): a repository of uniformly processed RNA-seq data
http://dee2.io
GNU General Public License v3.0
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Pipeline MEM estimation #50

Closed markziemann closed 5 years ago

markziemann commented 5 years ago

The error message calculated on line 1282 is wrong. For human it says 128GB ram is required but only ~60 is required.

echo Error, analysis of $ORG data requires at least $(echo $MEM_REQD $MEM_FACTOR | awk '{print $1*$2}') kB in RAM, but there is only $MEM available.

should be

echo Error, analysis of $ORG data requires at least $MEM_REQD kB in RAM, but there is only $MEM available.