markziemann / dee2

Digital Expression Explorer 2 (DEE2): a repository of uniformly processed RNA-seq data
http://dee2.io
GNU General Public License v3.0
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NumReadsQcPass bug #59

Closed markziemann closed 4 years ago

markziemann commented 5 years ago

cat SRR1791321.qc SequenceFormat:PE QualityEncoding:Sanger/Illumina1.9 Read1MinimumLength:51 Read1MedianLength:51 Read1MaxLength:51 Read2MinimumLength:51 Read2MedianLength:51 Read2MaxLength:51 NumReadsTotal:14358958 NumReadsQcPass:=13560953 QcPassRate:0% PE_Read1_StarMapRateTest:46 PE_Read2_StarMapRateTest:46 PE_Read1_Excluded:FALSE PE_Read2_Excluded:FALSE MappingFormat:PE STAR_UniqMappedReads:6480172 STAR_Strandedness:Unstranded STAR_UnmappedReads:2075970 STAR_MultiMappedReads:5017167 STAR_NoFeatureReads:1866718 STAR_AmbiguousReads:284570 STAR_AssignedReads:4328884 STAR_UniqMapRate:inf% STAR_AssignRate:inf% Kallisto_Kmer:31 Kallisto_MappedReads:3519224 Kallisto_MapRate:inf% QC_SUMMARY: