please add COVID-19 data

markziemann / dee2

Digital Expression Explorer 2 (DEE2): a repository of uniformly processed RNA-seq data

http://dee2.io

GNU General Public License v3.0

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please add COVID-19 data #76

Closed markziemann closed 4 years ago

markziemann commented 4 years ago

I'm new to RNA Seq analysis and I have found "Degust" tool extremely powerful and easy to use. I work on COVID-19 data sets and these data sets are not currently available on Degust. Can you kindly add them.

GSE147507 and GSE148729 If you can give some guidance on how to carry out small RNA analysis also along with mRNA it would be very helpful.

markziemann commented 4 years ago

COVID-19 & SARS-COV-2 GSE148829 N GSE145926 Y GSE147507 Y GSE148729 Y GSE147194 Y

Chloroquine GSE117769 Y GSE74235 Y GSE50957 Y

Remdesivir None

markziemann commented 4 years ago

I've just started this analysis on my biggest server, let's hope its done soon :)

markziemann commented 4 years ago

Runs have completed on the server - now they are being incorporated