markziemann / dee2

Digital Expression Explorer 2 (DEE2): a repository of uniformly processed RNA-seq data
http://dee2.io
GNU General Public License v3.0
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skewer problem #99

Closed markziemann closed 1 week ago

markziemann commented 1 year ago

So there is a known issue where this happens

https://github.com/relipmoc/skewer/issues/24 (Perhaps unsuprisingly... from Torsten!)

Solution is to run with -f sanger.

skewer -f sanger SRR6747861_1.fastq SRR6747861_2.fastq