There are a few interesting directions we can expand this analysis:
probe location enrichment. Instead of grouping the probes based on the gene name, we can group them based on other things like the location the probe is located. For example 1 Mbp bins.
pathway enrichment first step is to assign the probes to the pathways then then run GMEA on this.
There are a few interesting directions we can expand this analysis:
probe location enrichment. Instead of grouping the probes based on the gene name, we can group them based on other things like the location the probe is located. For example 1 Mbp bins.
pathway enrichment first step is to assign the probes to the pathways then then run GMEA on this.