obtain reactome gene sets - Githubissues

markziemann / mitch_legacy

An R package for multi-dimensional pathway enrichment analysis (legacy repo)

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obtain reactome gene sets #48

Closed markziemann closed 5 years ago

markziemann commented 5 years ago

https://github.com/markziemann/Mitch/blob/9b7ec949867e4437075dfccb1f81c88df77728cc/figs/fig1/fig1.R#L62 Following not working - ditch the shell script download.file("https://raw.githubusercontent.com/markziemann/Mitch/master/getReactomeGMT.sh", destfile="getReactomeGMT.sh")

markziemann commented 5 years ago

resolved