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marlichimi / beast-mcmc

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BEAUti generates a mergePatterns even when it is enclosing a single patterns element #427

Closed GoogleCodeExporter closed 8 years ago

GoogleCodeExporter commented 8 years ago 
When separating into codon positions,  BEUAti generates this

     <!-- The unique patterns for codon positions 1
           -->
    <mergePatterns id="p079.CP1.p079.patterns">

        <!-- The unique patterns from 1 to end every 3
       -->
        <!-- npatterns=10
       -->
        <patterns from="1" every="3">
            <alignment idref="alignment1"/>
        </patterns>
    </mergePatterns>

As far as my understanding goes, this is exactly the same as

               <patterns from="1" every="3" id="p079.CP1.p079.patterns">
            <alignment idref="alignment1"/>
        </patterns>

Original issue reported on code.google.com by ramb...@gmail.com on 7 Nov 2010 at 10:25

GoogleCodeExporter commented 8 years ago

Original comment by dong.w.xie@gmail.com on 22 Mar 2011 at 4:14