Implements new logic for handling boxes. Boxes are either defined via CLI or via provided starting coordinates. If they conflict the box with starting coordinates is taken. The 'dens' flag is completely ignored if the starting coordinates provide a box. Should this raise a warning???
This PR depends on vermouth PR #516 that implements reading of boxes.
Implements new logic for handling boxes. Boxes are either defined via CLI or via provided starting coordinates. If they conflict the box with starting coordinates is taken. The 'dens' flag is completely ignored if the starting coordinates provide a box. Should this raise a warning???
This PR depends on vermouth PR #516 that implements reading of boxes.