this PR changes the record level regarding the modifications. It is a bit excessive that a warning is issued for the cases when we get expected default behavior.
@csbrasnett there is one broken test: In the last test the modification 'A1' is provided. It was tested to give a warning. However, the warning was an incorrect one. I think the A1 should actually raise an error or a different warning.
Besides that I think we are missing a warning for the case when a protein residue is given but no modifications.
this PR changes the record level regarding the modifications. It is a bit excessive that a warning is issued for the cases when we get expected default behavior.
@csbrasnett there is one broken test: In the last test the modification 'A1' is provided. It was tested to give a warning. However, the warning was an incorrect one. I think the A1 should actually raise an error or a different warning.
Besides that I think we are missing a warning for the case when a protein residue is given but no modifications.