benchmark diva alone

[smilesun]

git clone https://github.com/marrlab/DomainLab.git   domainlab_diva
cd domainlab_diva
git checkout fbopt
./run_benchmark_slurm examples/benchmark/pacs_diva_fbopt_alone_es5.yaml 10

[DanScarc]

Running successfully.

[DanScarc]

rst.txt

[DanScarc]

Results before bug in yaml: rst_bug.txt

[smilesun]

'str_diva_multiplier_type': 'gammad_recon'

we probably should not run this option at all.

[DanScarc]

Should we be concerned about this? This has never happened so far to my knowledge.

[smilesun]

could you vim one of them and send a screen shot where the error message occur?

[DanScarc]

error_log.txt

[smilesun]

tks, it is my prlbem, i printed the name "error", will change the code so that "error" would not occur in loggin

[smilesun]

so code is fine

[smilesun]

@DanScarc , fixed in latest commit

https://github.com/marrlab/DomainLab/pull/462/commits/1d6345be904f3eed2b3d0afa4a2d1d8c56beba00

[DanScarc]

Should I rerun again, then?

[smilesun]

no

[smilesun]

post some results tomorrow morning here

[DanScarc]

Perfect, as suspected. I'll post results tomorrow!

[DanScarc]

rst.txt Here you go.

[smilesun]

so most jobs get stopped at iteration 8, i will fix this issue so we could run them long enough https://github.com/marrlab/DomainLab/issues/572

[smilesun]

fixed, could you pull and rerun the same yaml file?

you could delete all historical folders already.

[smilesun]

wait, let me do a last edit to yaml file

[DanScarc]

Running since 10'.

[DanScarc]

Ah ok, then killing jobs now. You tell me when you're sure.

[smilesun]

done, please run now

[smilesun]

snake make should use 3 cores at the moment.

[smilesun]

https://github.com/marrlab/DomainLab/pull/462/commits/4007dc8b52005d9773265d216d2bd27443373147,

use at least this commit

[DanScarc]

Running now

[smilesun]

do we have some intermediate results?

[DanScarc]

Yes. rst.txt

[DanScarc]

Updated results below rst.txt