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mars-research / DRAMHiT

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Get jellyfish dataset #2

Open arkivm opened 4 years ago

arkivm commented 4 years ago

Collect all the samples specified in jellyfish paper to setup a baseline

arkivm commented 4 years ago

M gallopavo https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2935454/bin/pbio.1000475.s001.doc

Homo Sapiens dataset https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2935454/ ftp://ftp.ncbi.nlm.nih.gov/genomes/Homo_sapiens/ARCHIVE/BUILD.37.3

Drosophila ananassae - ftp://ftp.flybase.net/genomes/Drosophila_ananassae/

Coxiella burnetii https://www.ncbi.nlm.nih.gov/nuccore/NC_002971.4?report=fasta

Zea Mays https://www.ncbi.nlm.nih.gov/genome/?term=Zea+mays

utsavjainb commented 4 years ago

M gallopavo dataset https://www.ncbi.nlm.nih.gov/assembly/GCA_000146605.4 M gallopavo old dataset https://www.ncbi.nlm.nih.gov/assembly/GCA_000146605.1/