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martaint / InterCellar

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InterCellar Cluster-verse Undirected Interactions Issue #3

Open Zaein opened 1 year ago

Zaein commented 1 year ago

I read through the vignette and searched through Google but was unable to find an answer to my question. If someone can help me here I would appreciate it!

I have used CellphoneDBv2 to generate results that I later put into InterCellar. Everything seems fine until I look under the table panel of the Cluster-verse. When I click on "Undirected Interactions" some of the ligands and receptors are mislabeled. They seem to be labeled correctly in cellphonedb. Have you seen this before? Also, will any other version of cellphonedb be supported in the future?

Cheers

martaint commented 1 year ago

Hi Zaein! Thank you for your message and for using InterCellar!

Would you be able to attach here the table that is showing you this issue and point me to some mislabelled interactions? Regarding other versions of CellphoneDB - unfortunately, I don't think InterCellar will support that in the future. InterCellar was my PhD project and I am now not in academia anymore, so I don't have the time to keep working on this.

I am looking for future maintainers, in case you're interested!

Best, Marta