martienssenlab maize-code issues

martienssenlab / maize-code

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Update MaizeCode_RNA_sample.sh

#28 joncahn opened 2 months ago
0
add r-gplots to the required packages

#27 jlynn86 opened 2 months ago
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bump to main

#26 eernst closed 3 months ago
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add r-plyr to the list of R packages required

#25 jlynn86 opened 3 months ago
1
Streaming alignment processing

#24 eernst closed 7 months ago
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Add libxml2 and r-xml2 to dependency list

#23 eernst opened 8 months ago
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Bug in IDR code prevents forward compatibility with numpy >=1.20.0

#22 eernst opened 8 months ago
2
PacBio and ONT direct methylation support

#21 eernst opened 8 months ago
0
Consider aligning ChIP-seq with Chromap

#20 eernst opened 8 months ago
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Sample file and reference genome path should be positional arguments

#19 eernst opened 8 months ago
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genome preparation

#18 joncahn opened 1 year ago
1
M c

#17 joncahn closed 1 year ago
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Arabidopsis

#16 joncahn closed 1 year ago
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Sh rna

#15 joncahn closed 2 years ago
1
shrna

#14 joncahn closed 3 years ago
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adding prelimary shRNA files

#13 joncahn closed 3 years ago
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Devel

#12 joncahn closed 3 years ago
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Devel

#11 joncahn closed 3 years ago
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Update MaizeCode_line_analysis.sh

#10 joncahn closed 3 years ago
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Devel

#9 joncahn closed 3 years ago
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Edits

#8 joncahn closed 3 years ago
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Edits

#7 joncahn closed 3 years ago
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Rna

#6 joncahn closed 3 years ago
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Updates

#5 joncahn closed 3 years ago
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Updates - Needs review

#4 joncahn closed 3 years ago
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Todo.7

#3 joncahn closed 3 years ago
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Updates

#2 joncahn closed 3 years ago
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Basic edits

#1 joncahn closed 3 years ago
0