It would be nice with a possibility to map all the references to the identified contigs/scaffolds, and visualize how well the references matches the queried sequences (matches, mismatches, inserts, deletes).
fx.
Pos 1 ATGC
Pos 2 ATGGQuery ATGC
Neg 1 ---C
It would be nice with a possibility to map all the references to the identified contigs/scaffolds, and visualize how well the references matches the queried sequences (matches, mismatches, inserts, deletes). fx. Pos 1 ATGC Pos 2 ATGG Query ATGC Neg 1 ---C