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martinjzhang / scDRS

Single-cell disease relevance score (scDRS)
https://martinjzhang.github.io/scDRS/
MIT License
105 stars 13 forks source link

Merge sparse to dense #7

Closed martinjzhang closed 2 years ago

martinjzhang commented 2 years ago
  1. Add scdrs.pp.preprocess for covariate correction and precomputing statistics.
  2. Update scdrs.method.score_cell based on scdrs.pp.preprocess
  3. Move reg_out, compute_stats, _get_mean_var to scdrs.pp
  4. Update compute_score.py accordingly.
  5. Files in scdrs/data/res/* are pushed because otherwise I cannot do the git rebase