search

marvinm2 / AOPWikiRDF

This repository contains code for the AOP-Wiki XML-to-RDF conversion and guidance to deploy a Virtuoso SPARQL endpoint Docker image that is loaded with the AOP-Wiki RDF
MIT License
7 stars 1 forks source link

Ontologies without linkout #3

Open marvinm2 opened 6 years ago

marvinm2 commented 6 years ago

Ontologies that are not currently marked with a URI for biological objects

Ontologies that are not currently marked with a URI for biological processes

For cell terms, organ terms and biological action, WIKI is used (meaning AOP-wiki), for which a URI should be minted.

egonw commented 6 years ago

BTW, another thought... for ontology terms you should use as much as possible the ontology IRIs and not the identifiers.org IRIs...

marvinm2 commented 6 years ago

Done, and only WIKI and TAIR remain. WIKI is internal, TAIR has multiple options.. (But it is only 1 tag in the whole XML)