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masato-ogishi / Repitope

Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.
MIT License
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Fatal Error Loading Repitope #13

Closed paulrbuckley closed 4 years ago

paulrbuckley commented 4 years ago

Hi,

Over the last couple of days I have been working with Repitope. I have had a few errors i am trying to work through, but as of today, i cannot even load the package anymore. My 'rJava' is working as expected, however when i run

library(Repitope)

inside RStudio, i am told that the r session must be terminated due to a fatal error. If i run in terminal, i am given the following:

_"R(1268,0x10926fdc0) malloc: error for object 0x7fff93978890: pointer being freed was not allocated R(1268,0x10926fdc0) malloc: set a breakpoint in malloc_errorbreak to debug Abort trap: 6"

i am wondering if you had any thoughts on what this could mean?

best

Paul

masato-ogishi commented 4 years ago

To me it looks like a hardware problem. I recommend you reinstalling R and RStudio. Also try different libraries to see if this is package-dependent or -independent.

Good luck, Masato